Publications

Quantitative Imaging


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Publications of R. Lagerstrom
Articles in journal or book chapters
  1. M. Berman, L. Bischof, R. Lagerstrom, Y. Guo, J. Huntington, P. Mason, and A. Green. A Comparison Between Three Sparse Unmixing Algorithms Using a Large Library of Shortwave Infrared Mineral Spectra. IEEE Transactions on Geoscience and Remote Sensing, 55(6):3588--3610, June 2017. [DOI] [bibtex-entry]

  2. R. Lagerstrom, Y. Arzhaeva, P. Szul, O. Obst, R. Power, B. Robinson, and T. Bednarz. Image Classification to Support Emergency Situation Awareness. Frontiers in Robotics and AI, 3:54, 2016. [DOI] [bibtex-entry]

  3. H. Tan, D. Wang, R. Li, C. Sun, R. Lagerstrom, Y. He, Y. Xue, and T. Xiao. A robust method for high-precision quantification of the complex three-dimensional vasculatures acquired by X-ray microtomography. Journal of Synchrotron Radiation, 23(5):1216--1226, September 2016. [DOI] [bibtex-entry]

  4. D. Wang, L. Bischof, R. Lagerstrom, V. Hilsenstein, A. Hornabrook, and G. Hornabrook. Automated Opal Grading by Imaging and Statistical Learning. IEEE Transactions on Systems, Man, and Cybernetics: Systems, 46(2):185--201, February 2016. [DOI] [bibtex-entry]

  5. T. Bednarz, D. Wang, Y. Arzhaeva, R. Lagerstrom, P. Vallotton, N. Budett, A. Khassapov, P. Szul, S. Chen, C. Sun, L. Domanski, D. Thompson, T. Gureyev, and J. Taylor. Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks. In C. Sun, T. Bednarz, T. D. Pham, P. Vallotton, and D. Wang, editors,Signal and Image Analysis for Biomedical and Life Sciences, chapter 11, pages 191--205. Springer, 2015. [DOI] [bibtex-entry]

  6. R. Lagerstrom, K. Holt, Y. Arzhaeva, L. Bischof, S. Haberle, F. Hopf, and D. Lovell. Pollen Image Classification Using the Classifynder System: Algorithm Comparison and a Case Study on New Zealand Honey. In C. Sun, T. Bednarz, T. D. Pham, P. Vallotton, and D. Wang, editors,Signal and Image Analysis for Biomedical and Life Sciences, chapter 12, pages 207--226. Springer, 2015. [DOI] [bibtex-entry]

  7. R. Li, D. Wang, C. Sun, R. Lagerstrom, H. Tan, Y. He, and T. Xiao. Towards Automated Quantitative Vasculature Understanding via Ultra High-Resolution Imagery. In C. Sun, T. Bednarz, T. D. Pham, P. Vallotton, and D. Wang, editors,Signal and Image Analysis for Biomedical and Life Sciences, chapter 10, pages 177--189. Springer, 2015. [DOI] [bibtex-entry]

  8. R. Lagerstrom and M. Buckley. An Attribute Weighted Distance Transform. Pattern Recognition Letters, 33(16):2141--2147, December 2012. [DOI] [bibtex-entry]

  9. L. Domanski, C. Sun, R. Lagerstrom, D. Wang, L. Bischof, M. Payne, and P. Vallotton. High Throughput Detection of Linear Features: Selected Applications in Biological Imaging. In G. Dougherty, editor, Medical Image Processing: Techniques and Applications, chapter 8, pages 167--191. Springer, 2011. [DOI] [bibtex-entry]

  10. D. Wang, R. Lagerstrom, C. Sun, L. Bischof, P. Vallotton, and M. Götte. HCA-Vision: Automated Neurite Outgrowth Analysis. Journal of Biomolecular Screening, 15(9):1165--1170, October 2010. [DOI] [bibtex-entry]

  11. M. Berman, A. Phatak, R. Lagerstrom, and B.R. Wood. ICE: A new method for the multivariate curve resolution of hyperspectral images. Journal of Chemometrics, 23(2):101--116, February 2009. [bibtex-entry]

  12. R. Lagerstrom, C. Sun, and P. Vallotton. Boundary Extraction of Linear Features Using Dual Paths through Gradient Profiles. Pattern Recognition Letters, 29(12):1753--1757, September 2008. [DOI] [bibtex-entry]

  13. P. Vallotton, R. Lagerstrom, C. Sun, M. Buckley, D. Wang, M. De Silva, S.-S. Tan, and J. Gunnersen. Automated Analysis of Neurite Branching in Cultured Cortical Neurons Using HCA-Vision. Cytometry, Part A, 71A(10):889--895, October 2007. [DOI] [bibtex-entry]

  14. M. Berman, H. Kiiveri, R. Lagerstrom, A. Ernst, R. Dunne, and J. Huntington. ICE: A statistical approach to identifying endmembers. IEEE Transactions on Geoscience and Remote Sensing, 42:2085-2095, 2004. [bibtex-entry]

Conference articles
  1. A. Rispler, S. Gensemer, S. Gao, T. Doody, C. Sun, and R. Lagerstrom. Payload verification and testing for the CSIROSat-1 mission. In 43rd COSPAR Scientific Assembly, Sydney, Australia, 28 January-4 February 2021. [bibtex-entry]

  2. D. Wang, R. Lagerstrom, C. Sun, C. Laukamp, M. Quigley, L. Whitbourn, P. Mason, P. Connor, and L. Fisher. Automated Vein Detection for Drill Core Analysis by Fusion of Hyperspectral and Visible Image Data. In 23rd International Conference on Mechatronics and Machine Vision in Practice, Nanjing, China, 28-30 November 2016. [DOI] [bibtex-entry]

  3. T. Bednarz, P. Szul, Y. Arzhaeva, D. Wang, N. Burdett, A. Khassapov, S. Chen, P. Vallotton, R. Lagerstrom, T. Gureyev, and J. Taylor. Biomedical image analysis and processing in clouds. In 2013 International Symposium on Computational Models for Life Sciences, volume 1559, Sydney, Australia, pages 77--79, 27-29 November 2013. AIP. [bibtex-entry]

  4. R. Lagerstrom, Y. Arzhaeva, L. Bischof, S. Haberle, F. Hopf, and D. Lovell. A Comparison of Classification Algorithms within the Classifynder Pollen Imaging System. In International Symposium on Computational Models for Life Sciences, Sydney, Australia, pages 250--259, 27-29 November 2013. [bibtex-entry]

  5. R. Lagerstrom, L. Bischof, D. Wang, and V. Hilsenstein. Objective Image Based Grading of Opal Gemstones. In Proceedings of the 2010 International Conference on Image Processing, Computer Vision and Pattern Recognition, Las Vegas, USA, pages 125--129, 12-15 July 2010. CSREA Press. [bibtex-entry]

  6. D. Wang, L. Bischof, B. Dai, R. Lagerstrom, G. Hornabrook, and P. Sutton. Accelerated Gemological Image Analysis for Opal Grading. In Proceedings of The 31st International Congress on Imaging Sciences, Beijing, pages 76--79, 12-16 May 2010. [bibtex-entry]

  7. R. Lagerstrom and M. Buckley. A Graph Watershed Method for Analysis and Quantification of Neurite Branching Structure. In Proceedings of the 18th World IMACS/MODSIM Congress, Cairns, Australia, pages 762--767, 13-17 July 2009. [bibtex-entry]

  8. S. Mayo, R. Evans, F. Chen, and R. Lagerstrom. X-ray Phase Contrast Micro-Tomography and Image Analysis of Wood Microstructure. In Proceedings of the 9th International Conference on X-Ray Microscopy, Zurich, Switzerland, 21-25 July 2009. [bibtex-entry]

  9. I. Sintorn, L. Bischof, R. Lagerstrom, M.J. Buckley, and A. Hoffman. Towards nuclear phenotype recognition in single channel fluorescence microscopy images. In Patrice Delmas, Jason James, and John Morris, editors, Image and Vision Computing New Zealand, pages 227--231, 27-29 November 2006. [bibtex-entry]

  10. M. Berman, A. Phatak, and R. Lagerstrom. ICE: A statistical approach to identifying endmembers in biomedical hyperspectral images. In SPIE Proceedings, volume 5694, San Jose, U.S.A., pages 62-73, 2005. [bibtex-entry]

  11. M.J Buckley and R Lagerstrom. Labelled Reconstruction of Binary Objects: A Vector Propagation Algorithm. In C. Ronse, L. Najman, and E. Decenciere, editors, Mathematical Morphology : 40 Years On (Proceedings of the 7th International Symposium on Mathematical Morphology - ISMM'2005), volume 30 of Computational Imaging and Vision, Dordrecht, pages 117-128, 2005. Springer-Verlag. [bibtex-entry]

  12. M. Berman, H. Kiiveri, R. Lagerstrom, A. Ernst, R. Dunne, and J. Huntington. ICE: An automated statistical approach to identifying endmembers. In Proc. 2003 IEEE International Geoscience and Remote Sensing Symposium, volume 1, Toulouse, France, pages 279-283, July 2003. [bibtex-entry]

Miscellaneous
  1. L. Bischof, M.J. Buckley, R. Lagerstrom, C. Sun, H. Talbot, D. Wang, and P. Vallotton. Image Analysis of Neurite Branching: High-Content Screening at High Speed. American Biotechnology Laboratory, 23(10):22, September 2005. [WWW] [bibtex-entry]


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