Publications

Quantitative Imaging


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Publications of year 2011
Books and proceedings
  1. T. Pham, X. Zhou, H. Tanaka, M. Oyama-Higa, X. Jiang, C. Sun, J. Kowalski, and X. Jia. Proceedings of International Symposium on Computational Models for Life Sciences, volume 1371. American Institute of Physics, 2011. 
    @book{pham-etal11cmls,
author = {T. Pham and X. Zhou and H. Tanaka and M. Oyama-Higa and X. Jiang and C. Sun and J. Kowalski and X. Jia},
title = {Proceedings of International Symposium on Computational Models for Life Sciences},
year = {2011},
month = {},
volume = {1371},
publisher = {American Institute of Physics},
series = {},
address = {},
edition = {} 
}

Articles in journal or book chapters
  1. L. Domanski, C. Sun, R. Lagerstrom, D. Wang, L. Bischof, M. Payne, and P. Vallotton. High Throughput Detection of Linear Features: Selected Applications in Biological Imaging. In G. Dougherty, editor, Medical Image Processing: Techniques and Applications, chapter 8, pages 167--191. Springer, 2011. [DOI] 
    @incollection{domanski-etal11dougherty,
author = {L. Domanski and C. Sun and R. Lagerstrom and D. Wang and L. Bischof and M. Payne and P. Vallotton},
title = {High Throughput Detection of Linear Features: Selected Applications in Biological Imaging},
year = {2011},
month = {},
volume = {},
booktitle = {~Medical Image Processing: Techniques and Applications},
editor = {G. Dougherty},
publisher = {Springer},
chapter = {8},
pages = {167--191},
doi = {http://doi.org/10.1007/978-1-4419-9779-1_8},
series = {},
address = {},
edition = {} 
}

  2. Y. Guo and R. Li. A Multi-Agent Machine Learning Framework for Intelligent Energy Demand Management. In G. Trajkovski, editor,Developments in Intelligent Agent Technologies and Multi-Agent Systems: Concepts and Applications, chapter 13 , pages 198--212. IGI, 2011. 
    @incollection{BookMA2011,

 author = {Guo, Y. and Li, R.},

 title = {A Multi-Agent Machine Learning Framework for Intelligent Energy Demand Management},

 editor = {G. Trajkovski},

 booktitle = {Developments in Intelligent Agent Technologies and Multi-Agent Systems: Concepts and Applications},

 publisher = {IGI},

 year = {2011},

 pages = {198--212},

 chapter = {13}
 
}

  3. M. H. Abreu, R. Lyons, W. Hughes, K. Mele, P. Vallotton, and R. Daly. Gab2 regulates cytoskeletal organization and migration of mammary epithelial cells by modulating RhoA activation. Molecular Biology of the Cell, 22(1):105--116, January 2011. 
    @article{abreu-etal11,
author = {M. H. Abreu and R. Lyons and W. Hughes and K. Mele and P. Vallotton and R. Daly},
title = {Gab2 regulates cytoskeletal organization and migration of mammary epithelial cells by modulating {RhoA} activation},
year = {2011},
volume = {22},
month = Jan,
journal = {Molecular Biology of the Cell},
number = {1},
pages = {105--116} 
}

  4. J. Wall andY. Guo, J. Li, and S. West. A Dynamic Machine Learning-based Technique for Automated Fault Detection in HVAC Systems. ASHRAE Transactions, 117:1--8, 2011. [DOI] 
    @article{Wall -etal11kat,

 title={A Dynamic Machine Learning-based Technique for Automated Fault Detection in HVAC Systems},

 author={J. Wall andY. Guo and J. Li and S. West},

 journal={ASHRAE Transactions},

 year={2011},

 month={},

 volume={117},

 pages={1--8},

 doi = {}
 
}

  5. C. A. James, K. Haustein, T. Bednarz, L. Alem, C. Caris, and A. Castleden. Remote Operation of Mining Equipment Using Panoramic Display Systems: Exploring the Sense of Presence. The Ergonomics Open Journal, 4:93--102, 2011. 
    @article{james-etal11,
author = {James, C. A. and Haustein, K. and Bednarz, T. and Alem, L. and Caris, C. and Castleden, A.},
title = {Remote Operation of Mining Equipment Using Panoramic Display Systems: Exploring the Sense of Presence},
journal = {The Ergonomics Open Journal},
volume = {4},
pages = {93--102},
year = {2011} 
}

  6. C. Lau, R. O'Shea, B. Broberg, L. Bischof, and P. Beart. The Rho kinase inhibitor Fasudil up-regulates astrocytic glutamate transport subsequent to actin remodelling in murine cultured astrocytes. British Journal of Pharmacology, 163(3):533-545, 2011. 
    @article{Lau-etal2011,
author = {C. Lau and R. O'Shea and B. Broberg and L. Bischof and P. Beart},
title= {The Rho kinase inhibitor Fasudil up-regulates astrocytic glutamate transport subsequent to actin remodelling in murine cultured astrocytes},
year = {2011},
pages = {533-545},
month = {},
number = {3},
volume = {163},
journal = {British Journal of Pharmacology},

}

  7. F. Li, S. Brown, T. Cornwell, and F. De Hoog. The application of compressive sampling to radio astronomy II: Faraday rotation measure synthesis. Astronomy and Astrophysics, 531:A126, 2011. [DOI] 
    @article{lietal11RMS,
title={The application of compressive sampling to radio astronomy II: Faraday rotation measure synthesis},
author={F. Li and S. Brown and T. Cornwell and De Hoog, F.},
journal={Astronomy and Astrophysics},
volume={531},
pages={A126},
doi = {http://doi.org/10.1051/0004-6361/201015890},
year={2011} 
}

  8. F. Li, T. Cornwell, and F. De Hoog. The Application of Compressive Sampling to Radio Astronomy I: Deconvolution. Astronomy and Astrophysics, 528:A31, 2011. 
    @article{li-etal11cs,
title={The Application of Compressive Sampling to Radio Astronomy I: Deconvolution},
author={Li, F. and Cornwell, T. and De Hoog, F.},
journal={Astronomy and Astrophysics},
volume={528},
pages={A31},
year={2011},

}

  9. P. Vallotton, C. Sun, D. Lovell, M. Savelsbergh, M. Payne, and G. Muench. Identifying weak linear features with the 'Coalescing Shortest Path Image Transform'. Microscopy and Microanalysis, 17(6):911--914, December 2011. [DOI] 
    @article{vallotton-etal11,
author = {P. Vallotton and C. Sun and D. Lovell and M. Savelsbergh and M. Payne and G. Muench},
title = {Identifying weak linear features with the 'Coalescing Shortest Path Image Transform'},
year = {2011},
journal = {Microscopy and Microanalysis},
month = Dec,
volume = {17},
number = {6},
pages = {911--914},
doi = {http://doi.org/10.1017/S1431927611012128} 
}

Conference articles
  1. R. Beare and P. T. Jackway. Parallel Algorithms Via Scaled Paraboloid Structuring Functions for Spatially-Variant and Label-Set Dilations and Erosions. In Proceedings 2011 International Conference on Digital Image Computing: Techniques and Applications (DICTA 2011), Noosa, Australia, pages 180--185, December 2011. [DOI] 
    @InProceedings{beare-11dicta,
author = "R. Beare and P. T. Jackway",
title = "Parallel Algorithms Via Scaled Paraboloid Structuring Functions for Spatially-Variant and Label-Set Dilations and Erosions",
booktitle = "Proceedings 2011 International Conference on Digital Image Computing: Techniques and Applications ({DICTA} 2011)",
address = "Noosa, Australia",
pages = "180--185",
month = dec,
year = "2011",
doi = "http://doi.org/10.1109/DICTA.2011.37" 
}

  2. T. Bednarz, L. Domanski, and J. Taylor. Computational Fluid Dynamics using OpenCL - a Practical Introduction. In 19th International Congress on Modelling and Simulation, pages 608--612, 2011. Modelling and Simulation Society of Australia and New Zealand. [WWW] 
    @inproceedings{bednarz-etal11modsim,
author = {Bednarz, T. and Domanski, L. and Taylor, J.},
title = {Computational Fluid Dynamics using OpenCL - a Practical Introduction},
booktitle = {19th International Congress on Modelling and Simulation},
publisher = {Modelling and Simulation Society of Australia and New Zealand},
pages = {608--612},
year = {2011},
url = {http://www.mssanz.org.au/modsim2011/A8/bednarz.pdf} 
}

  3. L. Domanski, T. Bednarz, T. Gureyev, L. Murray, E. Huang, and J. Taylor. Applications of Heterogeneous Computing in Computational and Simulation Science. In Fourth IEEE International Conference on Utility and Cloud Computing (UCC) 2011, pages 382--389, December 2011. IEEE Computer Society.
    Note: Other authors: Ya. I. Nesterets, D. Thompson, E. Jones, C. Cavanagh, D. Wang, P. Vallotton, C. Sun, N. Margvelashvili, A. Khassapov, A. Stevenson, S. Mayo, M. Morell and A. W. George. 
    @inproceedings{domanski-etal11icucc,
author = {Domanski, L. and Bednarz, T. and Gureyev, T. and Murray, L. and Huang, E. and Taylor, J.},
title = {Applications of Heterogeneous Computing in Computational and Simulation Science},
booktitle = {Fourth IEEE International Conference on Utility and Cloud Computing (UCC) 2011},
publisher = {IEEE Computer Society},
pages = {382--389},
month = {December},
year = {2011},
note = {Other authors: Ya. I. Nesterets, D. Thompson, E. Jones, C. Cavanagh, D. Wang, P. Vallotton, C. Sun, N. Margvelashvili, A. Khassapov, A. Stevenson, S. Mayo, M. Morell and A. W. George} 
}

  4. L. Domanski, T. Bednarz, P. Vallotton, and J. Taylor. Heterogeneous parallel 3D image deconvolution on a cluster of GPUs and CPUs. In 19th International Congress on Modelling and Simulation, pages 613--619, December 2011. Modelling and Simulation Society of Australia and New Zealand. [WWW] 
    @inproceedings{domanski-etal11modsim,
author = {Domanski, L. and Bednarz, T. and Vallotton, P. and Taylor, J.},
title = {Heterogeneous parallel 3D image deconvolution on a cluster of GPUs and CPUs},
booktitle = {19th International Congress on Modelling and Simulation},
publisher = {Modelling and Simulation Society of Australia and New Zealand},
pages = {613--619},
month = {December},
year = {2011},
url = {http://www.mssanz.org.au/modsim2011/A8/domanski.pdf} 
}

  5. Y. Guo, J. Wall, J. Li, and Sam West. A Machine Learning Approach for Fault Detection in Multi-variable Systems. In 2nd International Workshop on Agent Technologies for Energy System, Taipei, Taiwan , 2 May 2011. 
    @inproceedings{Guo-etal11iwates,

 author = {Y. Guo and J. Wall and J. Li and Sam West},

 title = {A Machine Learning Approach for Fault Detection in Multi-variable Systems},

 year = {2011},

 month = {2 May},

 volume = {},

 booktitle = {2nd International Workshop on Agent Technologies for Energy System},

 editor = {},

 organization = {},

 doi = {},

 pages = {},

 publisher = {},

 address = {Taipei, Taiwan}
 
}

  6. V. Hilsenstein, R. Li, and J. A. McCulloch. Machine-vision sensor for prawn aquaculture. In Proceedings of Twenty-sixth International Conference on Image and Vision Computing New Zealand, pages , 2011. 
    @inproceedings{DICTA2011,

 booktitle = {Proceedings of Twenty-sixth International Conference on
 Image and Vision Computing New Zealand},

 author = {Hilsenstein, V. and Li, R. and McCulloch, J. A.},

 title = {Machine-vision sensor for prawn aquaculture},

 year = {2011},

 pages = {}
 
}

  7. L. Jiang, J. Li, S. Luo, J. Jin, and S. West. Literature Review of Power Disaggregation. In International Conference on Modelling, Identification and Control, Shanghai, China , June 2011. 
    @inproceedings{Jiang-etal11,

 author = {L. Jiang and J. Li and S. Luo and J. Jin and S. West},

 title = {Literature Review of Power Disaggregation},

 year = {2011},

 month = {June},

 volume = {},

 booktitle = {International Conference on Modelling, Identification and Control},

 editor = {},

 organization = {},

 doi = {},

 pages = {},

 publisher = {},

 address = {Shanghai, China}
 
}

  8. S. Luo, J. J. Jin, and J. Li. A Knowledge-based Approach for Segmenting Cerebral Vasculature in Neuroimages. In International Conference on Measuring Technology and Mechatronics Automation, Shanghai, China , pages 74--77, 6-7 January 2011. 
    @inproceedings{Luo-etal11icmtma,

 author = {S. Luo and J. J. Jin and J. Li},

 title = {A Knowledge-based Approach for Segmenting Cerebral Vasculature in Neuroimages},

 year = {2011},

 month = {6-7 January},

 volume = {},

 booktitle = {International Conference on Measuring Technology and Mechatronics Automation},

 editor = {},

 organization = {},

 doi = {},

 pages = {74--77},

 publisher = {},

 address = {Shanghai, China}
 
}

  9. R. Marchant and P. T. Jackway. Generalised Hilbert Transforms for the Estimation of Growth Direction in Coral Cores. In Proceedings 2011 International Conference on Digital Image Computing: Techniques and Applications (DICTA 2011), Noosa, Australia, pages 660--665, December 2011. [DOI] 
    @InProceedings{marchant-11dicta,
author = "R. Marchant and P. T. Jackway",
title = "Generalised Hilbert Transforms for the Estimation of Growth Direction in Coral Cores",
year = "2011",
booktitle = "Proceedings 2011 International Conference on Digital Image Computing: Techniques and Applications ({DICTA} 2011)",
address = "Noosa, Australia",
pages = "660--665",
month = dec,
doi = "http://doi.org/10.1109/DICTA.2011.117",

}

  10. A. Massoudi, A. Sowmya, K. Mele, and D. Semenovich. Employing temporal information for cell segmentation using max-flow/min-cut in phase-contrast video microscopy. In Proceedings of the International Conference of the IEEE Engineering in Medicine and Biology Society, Boston, MA, pages 5985--5988, August 30 - September 3 2011. 
    @inproceedings{massoudi2011emp,
author = {Massoudi, A. and Sowmya, A. and Mele, K. and Semenovich, D.},
title = {Employing temporal information for cell segmentation using max-flow/min-cut in phase-contrast video microscopy},
year = {2011},
month = {August 30 - September 3},
volume = {},
booktitle = {Proceedings of the International Conference of the IEEE Engineering in Medicine and Biology Society},
editor = {},
organization = {},
pages = {5985--5988},
publisher = {},
address = {Boston, MA} 
}

  11. R. Su, C. Sun, and T. D. Pham. Junction Detection for Linear Structures. In International Symposium on Computational Models for Life Sciences, volume 1371, Toyama City, Japan, pages 29--36, 11-13 October 2011. [DOI] 
    @inproceedings{su-etal11cmls,
author = {R. Su and C. Sun and T. D. Pham},
title = {Junction Detection for Linear Structures},
year = {2011},
month = {11-13 October},
volume = {1371},
booktitle = {International Symposium on Computational Models for Life Sciences},
editor = {},
organization = {},
doi = {http://doi.org/10.1063/1.3596624},
pages = {29--36},
publisher = {},
address = {Toyama City, Japan},

}

  12. E. Urbach, M. Pervukhina, and L. Bischof. Segmentation of Cracks in Shale Rock. In International Symposium on Mathematical Morphology, pages 451--460, 2011. 
    @inproceedings{DBLP:conf/ismm/UrbachPB11,
author = {E. Urbach and M. Pervukhina and L. Bischof},
title = {Segmentation of Cracks in Shale Rock},
booktitle = {International Symposium on Mathematical Morphology},
year = {2011},
pages = {451--460} 
}

  13. P. Vallotton, D. Lovell, and J. Newman. An observation about circular shortest paths - Dealing with additional constraints using Branch and Bound. In Digital Image Computing: Techniques and Applications, Noosa, Australia, pages 513--517, 6-8 December 2011. [DOI] 
    @inproceedings{vallotton-etal11dicta,
author = {P. Vallotton and D. Lovell and J. Newman},
title = {An observation about circular shortest paths - Dealing with additional constraints using Branch and Bound},
year = {2011},
month = {6-8 December},
volume = {},
booktitle = {Digital Image Computing: Techniques and Applications},
editor = {},
organization = {},
pages = {513--517},
doi = {http://doi.org/10.1109/DICTA.2011.92},
publisher = {},
address = {Noosa, Australia} 
}

  14. H. Yu and D. Wang. Comparison Study of Two Energy Minimization Based Image Segmentation Methods. In Digital Image Computing: Techniques and Applications, Noosa, Australia, pages 633--638, 6-8 December 2011. [DOI] 
    @inproceedings{yu-wang11dicta,
author = {H. Yu and D. Wang},
title = {Comparison Study of Two Energy Minimization Based Image Segmentation Methods},
year = {2011},
month = {6-8 December},
volume = {},
booktitle = {Digital Image Computing: Techniques and Applications},
editor = {},
organization = {},
pages = {633--638},
doi = {http://doi.org/10.1109/DICTA.2011.112},
publisher = {},
address = {Noosa, Australia} 
}

  15. C. Zhang, C. Sun, and T. D. Pham. Clustered Nuclei Splitting Using Curvature Information. In Digital Image Computing: Techniques and Applications, Noosa, Australia, pages 352--357, 6-8 December 2011. [DOI] 
    @inproceedings{zhang-etal11dicta,
author = {C. Zhang and C. Sun and T. D. Pham},
title = {Clustered Nuclei Splitting Using Curvature Information},
year = {2011},
month = {6-8 December},
volume = {},
booktitle = {Digital Image Computing: Techniques and Applications},
editor = {},
organization = {},
pages = {352--357},
doi = {http://doi.org/10.1109/DICTA.2011.66},
publisher = {},
address = {Noosa, Australia} 
}


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