2021

Welfare of farmed crocodilians: Identification of potential animal-based measures using elicitation of expert opinion

Small, Ali; Hewitt, Leisha. 2021 .Animals vol. 11, no. 12, : 18.

**Effect of prophylactic treatment with Chloramine-T on gill histology and microbiome of Atlantic Salmon (Salmo salar) under commercial conditions**

Quezada Rodriguez, Petra; Taylor, Richard; Samsing Pedrals, Francisca; Rigby, Megan; Wood, Andrew; Nowak, Barbara; Wynne, James. 2021 .Aquaculture vol. 546, no. 2022, : 11p..

Hydrogen peroxide treatment of Atlantic salmon temporarily decreases oxygen consumption but has negligible effects on hypoxia tolerance and aerobic performance

Wood, Andrew; Taylor, Richard; Quezada Rodriguez, Petra; Wynne, James. 2021 .Aquaculture vol. 540, : article 736676.

**Estimation of apparent dietary nutrient digestibility in kingfish Seriola lalandi by Near-Infrared Spectroscopy (NIRS).**

Simon, Cedric; Bourne, Nicholas; Hines, Barney; Pirozzi, Igor; Booth, Mark. 2021 .Aquaculture vol. 548, no. 737624, : 1-9.

**Feeding behaviour and bioavailability of essential amino acids in shrimp Penaeus monodon fed fresh and leached fishmeal and fishmeal-free diets**

Simon, Cedric; Truong, Ha; Habilay, Natalie; Hines, Barney. 2021 .Animals, vol. 2021, no. 11, pt. 847: 17.

**Feed intake, gastro-intestinal transit and haemolymph free amino acids in the shrimp Penaeus monodon are influenced by marine meal supplementation**

Truong, Ha; Hines, Barney; Rombenso, Artur; Simon, Cedric. 2021 .Aquaculture, vol. 533, no. 1, pt. 736171: 9.

**Lipoxygenase enzymes, oligosaccharides (Raffinose and Stachyose) and 11sA4 and A5 globulins of Glycinin present in soybean meal are not drivers of enteritis in juvenile Atlantic salmon (Salmo salar)**

Rombenso, Artur; Blyth, David; James, Andrew; Nikolaou, Teisha; Simon, Cedric. 2021 .Applied Sciences vol. 11, no. 19, : 13.

Novacq™ improves survival of Penaeus vannamei when challenged with pathogenic Vibrio parahaemolyticus

Noble, Tansyn; Rao, Min; Briggs, Matthew; Shinn, Andrew; Simon, Cedric; Wynne, James. 2021 .Aquaculture vol. 545, : 737235.

Rapid prediction of chemical composition and degree of starch cook of multi-species aquafeeds by Near Infrared Spectroscopy

Bourne, Nicholas; Blyth, David; Simon, Cedric. 2021 .Journal of Near Infrared Spectroscopy vol. 29, no. 4, : 10.

Dietary effects on the transient and resident bacterial communities in the gastrointestinal tract of Penaeus monodon

Noble, Tansyn; Truong, Ha; Rombenso, Artur; Simon, Cedric; Wade, Nick; Wynne, James. 2021 .Applied Microbiology and Biotechnology, vol. 105, : 1301–1313.

**The effect of antimicrobial treatment of Atlantic salmon (Salmo salar L.) upon the gill bacteriome and progression of amoebic gill disease (AGD) in vivo**

Slinger, Joel; Adams, Mark; Stratford, Chris; Rigby, Megan; Wynne, James. 2021 .Microorganisms vol. 9, no. 5, : 21.

**Evaluation of the infectious potential of Neoparamoeba perurans following freshwater bathing treatments**

Taylor, Richard; Slinger, Joel; Stratford, Chris; Rigby, Megan; Wynne, James. 2021 .Microorganisms vol. 9, : 967.

Development of a new real-time PCR for the detection of pilchard orthomyxovirus (POMV) in apparently healthy fish

Samsing Pedrals, Francisca; Tengesdal, Hedda; Nylund, Are; Rigby, Megan; Wiltshire, Kathryn; Morrison, Richard; Godwin, Scott; Giles, Carla; Wilson, Teresa; Mohr, Peter; Hoad, John; Wynne, James. 2021 .Aquaculture 737404.

Can Australian carp populations develop resistance to Cyprinid herpesvirus 3 (CyHV-3) if the agent is release as a biocontrol?

Samsing Pedrals, Francisca; Hopf, Jess; Davis, Stephen; Wynne, James; Durr, Peter. 2021 .Biological Control vol. 157, no. 104571, : 104571.

**Seawater transmission and infection dynamics of pilchard orthomyxovirus (POMV) in Atlantic salmon (Salmo salar)**

Samsing Pedrals, Francisca; Rigby, Megan; Tengesdal, Hedda; Taylor, Richard; Farias, Daniela; Morrison, Richard; Godwin, Scott; Giles, Carla; Carson, Jeremy; English, Chloe; Chong, Roger; Wynne, James. 2021 .Journal of Fish Diseases, vol. 44, no. 1, : 73-88.

**Profiling branchial bacteria of Atlantic salmon (Salmo salar L.) following exposure to antimicrobial agents**

Slinger, Joel; Wynne, James; Adams, Mark. 2021 .Frontiers in Animal Science vol. 2, no. 756101, : 14.

Dead or alive: Microbial viability treatment reveals both active and inactive bacterial constituents in the fish gut microbiota

Legrand, Thibault; Wos-Oxley, Melissa; Wynne, James; Weyrich, Laura; Oxley, Andrew. 2021 .Journal of Applied Microbiology vol. 131, no. 5, : 2528–2538.

Searching for the sweet spot of Amoebic Gill Disease of farmed Atlantic salmon: the potential role of glycan-lectin interactions in the adhesion of Neoparamoeba perurans

Walger de Camargo Lima, Paula; Hartley-Tassell, Lauren; Cooper, Oren; Wynne, James. 2021 .International Journal for Parasitology vol. 51, no. 7, : 545-557.

**Host-parasite interaction of Atlantic salmon (Salmo salar) and the ectoparasite Neoparamoeba perurans in amoebic gill disease**

Botwright, Natasha; Esmail, Amin Mohamed; Slinger, Joel; Walger de Camargo Lima, Paula; Wynne, James. 2021 .Frontiers in Immunology vol. 12, : Article 672700.

**The ability of Neoparamoeba perurans to bind to and digest non-fish-derived mucin: Insights into the amoeba’s mechanism of action to overcome gill mucus production**

Walger de Camargo Lima, Paula; Hartley-Tassell, Lauren; Addepalli, Rama; Wynne, James. 2021 .Journal of Fish Diseases vol. 44, no. 9, : 1355-1367.

**Immersion challenge of naïve Atlantic salmon with cultured Nolandella sp. and Pseudoparamoeba sp. did not increase the severity of Neoparamoeba perurans-induced amoebic gill disease (AGD)**

English, Chloe; Botwright, Natasha; Adams, Mark; Barnes, Andrew; Wynne, James; Walger de Camargo Lima, Paula; Cook, Mat. 2021 .Journal of Fish Diseases, vol. 44, : 149-160.

**Reduced transmission of IHHNV to Penaeus monodon from shrimp pond wastewater filtered through sand beds rearing Perinereis helleri polychaetes**

Cowley, Jeff; Rao, Min; Palmer, Paul. 2021 .Aquaculture, vol. 535, : 736359.

Genome organisation of Mourilyan virus: A shrimp wenrivirus with 4 RNA segments filling the phylogenetic niche between the animal phleboviruses and plant tenuiviruses

Cowley, Jeff. 2021 .Virus Research, vol. 292, pt. 198225: 11.

Biofloc technology (BFT) in shrimp farming: Past and present shaping the future

Emerenciano, Mauricio; Miranda-Baeza, Anselmo; Martínez-Porchas, Marcel; Poli, Moises; Vieira, Felipe do Nascimento. 2021 .Frontiers in Marine Science vol. 20, : 5.

Preliminary characterization of solids in the water of an integrated aquaponic and biofloc system

Lenz, Guilherme Luis; Lapa, Katt Regina; Viana, Marina Lapa; Emerenciano, Mauricio. 2021 .Archives of Marine Science 16.

**Effects of different stocking densities and supplementation with Saccharomyces cerevisiae in juvenile Nile tilapia cultivated in a recirculating water system (RAS)**

Freccia, Andre; Picoli, Fernanda; Ghizzo, Jonis Baesso; Faust, Miguel; Sanches, Eduardo Antonio; Emerenciano, Mauricio. 2021 .Research, Society and Development 15.

Nutritional requirements for native Brazilian catfish: A review

Durigon, Emerson Giuliani; Picoli, Fernanda; Tubin, Jiovani Sergio Bee; Rombenso, Artur; Lazzari, Rafael; Emerenciano, Mauricio. 2021 .Research, Society and Development 15.

FLOCponics: The integration of biofloc technology with plant production

Pinho, Sara; Lima, Jéssica P de; David, Luiz H.; Emerenciano, Mauricio; Goddek, Simon; Verdegem, Marc C J; Keesman, Karel J; Portella, Maria Célia. 2021 .Reviews in Aquaculture 28.

**Culture of pacu Piaractus mesopotamicus in biofloc technology (BFT): insights on dietary protein sparing and stomach content**

Sgnaulin, Tayna; Durigon, Emerson Giuliani; Thomas, Micheli Cristina; Mello, Giovanni Lemos de; Emerenciano, Mauricio. 2021 .Aquaculture international 16.

Water quality and productive response of Litopenaeus vannamei reared in biofloc with addition of commercial strains of nitrifying bacteria and Lactobacillus rhamnosus

Flores-Valenzuela, Edmundo; Miranda-Baeza, Anselmo; Rivas-Vega, Martha Elisa; Miranda-Arizmendi, Valeria; Beltran-Ramírez, Olga; Emerenciano, Mauricio. 2021 .Aquaculture 8.

**Sensorial attributes and growth performance of whiteleg shrimp (Litopenaeus vannamei) cultured in biofloc technology with varying water salinity and dietary protein content.**

Pinho, Sara; Emerenciano, Mauricio. 2021 .Aquaculture 7.

**Organoleptic and nutritional characteristics of fillets of Pirapitinga fed different protein sources in a biofloc system.**

Alzate-Díaz, Hernán Antonio; Muñoz-Ramírez, Adriana Patricia; Emerenciano, Mauricio; Pardo-Carrasco, Sandra Clemencia. 2021 .PESQUISA AGROPECUÁRIA BRASILEIRA 9.

Differential exoproteome and biochemical characterisation of Neoparamoeba perurans

Kerrie, Ni Dhufaigh; Botwright, Natasha; Dillon, Eugene; O’Connor, Ian; MacCarthy, Eugene; Slattery, Orla. 2021 .Microorganisms vol. 9, no. 6, : 14p.

**Comparative proteomic profiling of newly acquired, virulent and attenuated Neoparamoeba perurans proteins associated with amoebic gill disease**

Kerrie, Ni Dhufaigh; Dillon, Eugene; Botwright, Natasha; Talbot, Anita; O’Connor, Ian; MacCarthy, Eugene; Slattery, Orla. 2021 .Scientific Reports vol. 11, : 12p.