# COMPAS parameter file
CODEHEADER           COMPAS default version
PARAMETERHEADER      National model: v2. 5m bathmin, HFUN smooth. Removed Storr Is.
DESCRIPTION          National model 2km
NAME                 NAT
PROJECTION           geographic
TIMEUNIT             seconds since 1990-01-01 00:00:00
OUTPUT_TIMEUNIT      days since 1990-01-01 00:00:00
LENUNIT              metre
ID_NUMBER            2.95
#HISTORY              LOG DIFF
HISTORY              LOG

# 30-07-2022
START_TIME           11898 days
STOP_TIME            1 days

INPUT_FILE           inputs/national_restart.nc

RESTART_NAME         national_restart.nc
RESTART_DT           1 days
RESTART_COMPRESS     YES

# Output files
OutputPath           outputs
OutputFiles          1

file0.name           national.nc
file0.filetype       ugrid
file0.tinc           1 hour
file0.bytespervalue  4
file0.vars           ALL
file0.chunk          DAILY
file0.compress       YES

# Flags
WINDOWS              96
DP_MODE              openmp
SHOW_WINDOWS         YES
WINDOW_TYPE          METIS
METIS_OPTIONS        VOLUME_WEIGHTED
# READ_WIN_MAP         inputs/national_2.95_win_map_96.nc
NONLINEAR            YES
CALCDENS             YES
2D-MODE              NO
STABILITY            SUB-STEP-NOSURF
RAMPSTART            11898 days
RAMPEND              11899 days
RAMPVARS             WIND TIDALC CUSTOM
MERGE_THIN           YES
HMIN                 0.0700
SLIP                 1.0   
SIGMA                NO
SMOOTH_VARS          U1VH:3 CD:2
#COOKIE_CUT           box5n.bncc 0 tile0
#DEBUG_LOC	      us 427060 5
#CRASH_RECOVERY       OPTIMIZE DT:0.8 VH:20 VHL:100

# Time steps
DT                   2.0    seconds
IRATIO               2
TRATIO               1.0     

# Advection
MOM_SCHEME           VECINVAR WTOP_O2 WIMPLICIT APVM
TRA_SCHEME           QUICKEST|US
#TRA_SCHEME           VANLEER|US
#TRA_SCHEME           FFSL
ULTIMATE             YES
FILL_METHOD          NONE
#RUNGE-KUTTA          3

# Horizontal mixing
# Auto
U1VH                 region data/box11.bncc 0:60.0 1:6.0 2:6.0 3:10.0 4:-6.1 5:6.0 6:6.0 7:6.0 8:100.1 9:100.0 10:80.0 11:80.0
U1KH                 region data/box11.bncc 0:0.0 1:0.0 2:0.0 3:0.0 4:0.0 5:0.0 6:0.0 7:0.0 8:0.0 9:0.0 10:20.0 11:20.0
DIFF_SCALE           AUTO
#DIFF_SCALE            AUTO SCALEBI

VISC_METHOD          US_LAPLACIAN
#VISC_METHOD          US_BIHARMONIC

# Vertical mixing
MIXING_SCHEME        k-e
VZ0                  1.0000e-04
KZ0                  1.0000e-05
ZS                   0.001
#MIN_DISS             1.0e-12

# Bottom friction
QBFC                 0.003
UF                   0.00010
Z0                   0.001
#Z0                   0.0088

# Constants
G                    9.8100
SPECHEAT             3990.0
AIRDENS              1.2250
AMBIENT_AIR_PRESSURE 100800.0000

# Diagnostics
CFL                  PASSIVE
MIX_LAYER            NONE
MEAN                 NONE
VORTICITY            NONE
NUMBERS              RESOLUTION U1VH CELL_INDEX
ALERT                NONE
MOM_TEND             NO
CALC_FLUXES          NONE
CALC_PERCS           NONE
FLUSHING_TR          NO
TOTALS               NO
STERIC_HEIGHT        0.00  

# Grid
GRIDTYPE             UNSTRUCTURED
POWER_MESH           YES
Mesh2 unstructured   v1.0
nMaxMesh2_face_nodes 8
nMesh2_face_indices  1303724
nMesh2_face          433761
MESH_INFO            NO

# Mean horizontal edge length =  1712.79 m
# Mean horizontal distance between centres =  2981.85 m
# Minimum horizontal distance between centres =   155.47 m [147.965 -43.132]
# Maximum horizontal distance between centres = 32184.11 m [131.941 -7.468]
# Mean cell area = 1.1450e+07 m^2

# Vertical grid spacing
LAYERFACES           55
-5800.00
-5660.00
-5460.00
-5260.00
-5060.00
-4860.00
-4660.00
-4460.00
-4260.00
-4060.00
-3860.00
-3660.00
-3460.00
-3260.00
-3060.00
-2860.00
-2660.00
-2460.00
-2260.00
-2060.00
-1860.00
-1660.00
-1460.00
-1280.00
-1120.00
-970.00 
-850.00 
-740.00 
-640.00 
-550.00 
-480.00 
-410.00 
-350.00 
-300.00 
-260.00 
-220.00 
-190.00 
-160.00 
-130.00 
-110.00 
-96.00  
-79.00  
-65.00  
-52.00  
-42.00  
-33.00  
-25.00  
-18.00  
-13.00  
-8.30   
-4.30   
-3.00
-2.00
-1.00   
0.00    

# Bathymetry limits
BATHYMIN             5.0
BATHYMAX             5800.0
ETAMAX               10.0  
MIN_CELL_THICKNESS   20%
#SMOOTHING            2
MAXGRAD              0.06
#BATHY_NBLOCKS        2
#BATHY_MASK_VAL0      poly 15.0 greville.xy
#BATHY_MASK_VAL1      poly 15.0 storr.xy
#NLAND		     2
1
31858

# Tracers
NTRACERS             2

TRACER0.name         salt
TRACER0.long_name    Salinity
TRACER0.units        PSU
TRACER0.fill_value   35.0  
TRACER0.valid_range  0.0    55.0
TRACER0.advect       1
TRACER0.diffuse      1
TRACER0.diagn        0
TRACER0.data         forcing/omaps_ets.nc

TRACER1.name         temp
TRACER1.long_name    Temperature
TRACER1.units        degrees C
TRACER1.fill_value   20.0  
TRACER1.valid_range  -4.0   50.1 
TRACER1.advect       1
TRACER1.diffuse      1
TRACER1.diagn        0
TRACER1.data         forcing/omaps_ets.nc

SURFACE              forcing/omaps_ets.nc(eta=eta_t)


# Forcing
WIND_TS              forcing/access.nc(wind_v=v10)(wind_u=u10)
WIND_INPUT_DT        10.0   minutes
WIND_SPEED_SCALE     1.0   
DRAG_LAW_V0          10.0  
DRAG_LAW_V1          26.0  
DRAG_LAW_CD0         0.00114 
DRAG_LAW_CD1         0.00218 

PRESSURE             forcing/access.nc(pressure=mslp)
PRESSURE_INPUT_DT    10.0   minutes

SALTFLUX             BULK
PRECIPITATION        forcing/access.nc
PRECIPITATION_INPUT_DT  1 hour

HEATFLUX             ADVANCED
AIRTEMP              forcing/access.nc(air_temp=sfc_temp)
AIRTEMP_INPUT_DT     1 hour
CLOUD                forcing/access.nc
CLOUD_INPUT_DT       1 hour
DEW_POINT            forcing/access.nc(dew_point=dewpt_scrn)
DEW_POINT_INPUT_DT   1 hour
SWR_TRANSMISSION     0.05
SWR_ATTENUATION      0.3
SWR_BOT_ABSORB       1.0
HEATFLUX_REFH        10
HEATFLUX_ADVECT      NO
BULK_SCHEME          Ko

# Time series
TSPOINTS             0

TS0.name             loc1.ts
TS0.location         153.8938   -24.4907   0
TS0.dt               1 hour
TS0.reference        msl

TIDE_CSR_CON_DIR      tides/jhtide2/
TIDE_CSR_ORTHOWEIGHTS tides/ortho_csr_4.0
TIDE_CONSTITUENTS     tides/tpxo9v1_global_zUV_c_8con_double.nc

# Open boundaries
NBOUNDARIES           8
#NBOUNDARIES           0

BOUNDARY0.NAME          Offshore
BOUNDARY0.TYPE          u1
BOUNDARY0.BCOND_NOR     CUSTOM
BOUNDARY0.BCOND_NOR2D   VERTIN|TIDALC
BOUNDARY0.BCOND_ELE     NOTHIN|FILEIN|TIDALC
BOUNDARY0.BCOND_TAN     CUSTOM
BOUNDARY0.BCOND_TAN2D   VERTIN|TIDALC
BOUNDARY0.BCOND_TRA_ALL NOGRAD
BOUNDARY0.BCOND_TRA0    TRCONC
BOUNDARY0.BCOND_TRA1    TRCONC
BOUNDARY0.BCOND_VZ      NOGRAD
BOUNDARY0.BCOND_KZ      NOGRAD
BOUNDARY0.T_CONSTITUENTS  M2 S2 N2 K2 K1 O1 P1 Q1
BOUNDARY0.INVERSE_BAROMETER YES
BOUNDARY0.NSPONGE_HORZ  40000
BOUNDARY0.SPONGE_FACT  5.0   
#BOUNDARY0.ADJUST_RATIO  1.2
BOUNDARY0.ADJUST_FLUX    -1.2 seconds
BOUNDARY0.BATHY_SMOOTH  8 2
BOUNDARY0.BATHY_CON     3
BOUNDARY0.DATA          forcing/omaps_ets.nc(eta=eta_t)
BOUNDARY0.CUSTOM.u1     uv_to_u1 forcing/omaps_uv.nc
BOUNDARY0.CUSTOM.u2     uv_to_u2 forcing/omaps_uv.nc
BOUNDARY0.START_LOC     122.79 -11.02
BOUNDARY0.END_LOC       150.5920 -10.8132
BOUNDARY0.MID_LOC       122.4 -11.37

BOUNDARY1.NAME          Arafura1
BOUNDARY1.TYPE          u1
BOUNDARY1.BCOND_NOR     CUSTOM
BOUNDARY1.BCOND_NOR2D   VERTIN|TIDALC
BOUNDARY1.BCOND_ELE     NOTHIN|FILEIN|TIDALC
BOUNDARY1.BCOND_TAN     CUSTOM
BOUNDARY1.BCOND_TAN2D   VERTIN|TIDALC
BOUNDARY1.BCOND_TRA_ALL NOGRAD
BOUNDARY1.BCOND_TRA0    TRCONC
BOUNDARY1.BCOND_TRA1    TRCONC
BOUNDARY1.BCOND_VZ      NOGRAD
BOUNDARY1.BCOND_KZ      NOGRAD
BOUNDARY1.T_CONSTITUENTS  M2 S2 N2 K2 K1 O1 P1 Q1
BOUNDARY1.INVERSE_BAROMETER YES
#BOUNDARY1.NSPONGE_HORZ  8
#BOUNDARY1.SPONGE_FACT  5.0   
BOUNDARY1.ADJUST_FLUX   -1.2 seconds
BOUNDARY1.DATA          forcing/omaps_ets.nc(eta=eta_t)
BOUNDARY1.CUSTOM.u1     uv_to_u1 forcing/omaps_uv.nc
BOUNDARY1.CUSTOM.u2     uv_to_u2 forcing/omaps_uv.nc
BOUNDARY1.START_LOC     137.7 -8.0
BOUNDARY1.END_LOC       134.9 -6.93
BOUNDARY1.MID_LOC       137.2 -7.6

BOUNDARY2.NAME          Arafura2
BOUNDARY2.TYPE          u1
BOUNDARY2.BCOND_NOR     CUSTOM
BOUNDARY2.BCOND_NOR2D   VERTIN|TIDALC
BOUNDARY2.BCOND_ELE     NOTHIN|FILEIN|TIDALC
BOUNDARY2.BCOND_TAN     CUSTOM
BOUNDARY2.BCOND_TAN2D   VERTIN|TIDALC
BOUNDARY2.BCOND_TRA_ALL NOGRAD
BOUNDARY2.BCOND_TRA0    TRCONC
BOUNDARY2.BCOND_TRA1    TRCONC
BOUNDARY2.BCOND_VZ      NOGRAD
BOUNDARY2.BCOND_KZ      NOGRAD
BOUNDARY2.T_CONSTITUENTS  M2 S2 N2 K2 K1 O1 P1 Q1
BOUNDARY2.INVERSE_BAROMETER YES
#BOUNDARY2.NSPONGE_HORZ  8
#BOUNDARY2.SPONGE_FACT  5.0   
BOUNDARY2.ADJUST_FLUX   -1.2 seconds
BOUNDARY2.DATA          forcing/omaps_ets.nc(eta=eta_t)
BOUNDARY2.CUSTOM.u1     uv_to_u1 forcing/omaps_uv.nc
BOUNDARY2.CUSTOM.u2     uv_to_u2 forcing/omaps_uv.nc
BOUNDARY2.START_LOC     134.0 -6.90
BOUNDARY2.END_LOC       132.07 -7.18
BOUNDARY2.MID_LOC       133.4 -7.03

BOUNDARY3.NAME          Timor1
BOUNDARY3.TYPE          u1
BOUNDARY3.BCOND_NOR     CUSTOM
BOUNDARY3.BCOND_NOR2D   VERTIN|TIDALC
BOUNDARY3.BCOND_ELE     NOTHIN|FILEIN|TIDALC
BOUNDARY3.BCOND_TAN     CUSTOM
BOUNDARY3.BCOND_TAN2D   VERTIN|TIDALC
BOUNDARY3.BCOND_TRA_ALL NOGRAD
BOUNDARY3.BCOND_TRA0    TRCONC
BOUNDARY3.BCOND_TRA1    TRCONC
BOUNDARY3.BCOND_VZ      NOGRAD
BOUNDARY3.BCOND_KZ      NOGRAD
BOUNDARY3.T_CONSTITUENTS  M2 S2 N2 K2 K1 O1 P1 Q1
BOUNDARY3.INVERSE_BAROMETER YES
#BOUNDARY3.NSPONGE_HORZ  8
#BOUNDARY3.SPONGE_FACT  5.0   
BOUNDARY3.ADJUST_FLUX   -1.2 seconds
BOUNDARY3.DATA          forcing/omaps_ets.nc(eta=eta_t)
BOUNDARY3.CUSTOM.u1     uv_to_u1 forcing/omaps_uv.nc
BOUNDARY3.CUSTOM.u2     uv_to_u2 forcing/omaps_uv.nc
BOUNDARY3.START_LOC     130.7 -8.37
BOUNDARY3.END_LOC       130.05 -8.123
BOUNDARY3.MID_LOC       130.46 -8.3

BOUNDARY4.NAME          Timor2
BOUNDARY4.TYPE          u1
BOUNDARY4.BCOND_NOR     CUSTOM
BOUNDARY4.BCOND_NOR2D   VERTIN|TIDALC
BOUNDARY4.BCOND_ELE     NOTHIN|FILEIN|TIDALC
BOUNDARY4.BCOND_TAN     CUSTOM
BOUNDARY4.BCOND_TAN2D   VERTIN|TIDALC
BOUNDARY4.BCOND_TRA_ALL NOGRAD
BOUNDARY4.BCOND_TRA0    TRCONC
BOUNDARY4.BCOND_TRA1    TRCONC
BOUNDARY4.BCOND_VZ      NOGRAD
BOUNDARY4.BCOND_KZ      NOGRAD
BOUNDARY4.T_CONSTITUENTS  M2 S2 N2 K2 K1 O1 P1 Q1
BOUNDARY4.INVERSE_BAROMETER YES
#BOUNDARY4.NSPONGE_HORZ  8
#BOUNDARY4.SPONGE_FACT  5.0   
BOUNDARY4.ADJUST_FLUX   -1.2 seconds
BOUNDARY4.DATA          forcing/omaps_ets.nc(eta=eta_t)
BOUNDARY4.CUSTOM.u1     uv_to_u1 forcing/omaps_uv.nc
BOUNDARY4.CUSTOM.u2     uv_to_u2 forcing/omaps_uv.nc
BOUNDARY4.START_LOC     129.66 -8.15
BOUNDARY4.END_LOC       129.2 -8.25
BOUNDARY4.MID_LOC       129.45 -8.22

BOUNDARY5.NAME          Timor3
BOUNDARY5.TYPE          u1
BOUNDARY5.BCOND_NOR     CUSTOM
BOUNDARY5.BCOND_NOR2D   VERTIN|TIDALC
BOUNDARY5.BCOND_ELE     NOTHIN|FILEIN|TIDALC
BOUNDARY5.BCOND_TAN     CUSTOM
BOUNDARY5.BCOND_TAN2D   VERTIN|TIDALC
BOUNDARY5.BCOND_TRA_ALL NOGRAD
BOUNDARY5.BCOND_TRA0    TRCONC
BOUNDARY5.BCOND_TRA1    TRCONC
BOUNDARY5.BCOND_VZ      NOGRAD
BOUNDARY5.BCOND_KZ      NOGRAD
BOUNDARY5.T_CONSTITUENTS  M2 S2 N2 K2 K1 O1 P1 Q1
BOUNDARY5.INVERSE_BAROMETER YES
#BOUNDARY5.NSPONGE_HORZ  8
#BOUNDARY5.SPONGE_FACT  5.0   
BOUNDARY5.ADJUST_FLUX   -1.2 seconds
BOUNDARY5.DATA          forcing/omaps_ets.nc(eta=eta_t)
BOUNDARY5.CUSTOM.u1     uv_to_u1 forcing/omaps_uv.nc
BOUNDARY5.CUSTOM.u2     uv_to_u2 forcing/omaps_uv.nc
BOUNDARY5.START_LOC     128.78 -8.3
BOUNDARY5.END_LOC       128.33 -8.31
BOUNDARY5.MID_LOC       128.56 -8.3

BOUNDARY6.NAME          Timor4
BOUNDARY6.TYPE          u1
BOUNDARY6.BCOND_NOR     CUSTOM
BOUNDARY6.BCOND_NOR2D   VERTIN|TIDALC
BOUNDARY6.BCOND_ELE     NOTHIN|FILEIN|TIDALC
BOUNDARY6.BCOND_TAN     CUSTOM
BOUNDARY6.BCOND_TAN2D   VERTIN|TIDALC
BOUNDARY6.BCOND_TRA_ALL NOGRAD
BOUNDARY6.BCOND_TRA0    TRCONC
BOUNDARY6.BCOND_TRA1    TRCONC
BOUNDARY6.BCOND_VZ      NOGRAD
BOUNDARY6.BCOND_KZ      NOGRAD
BOUNDARY6.T_CONSTITUENTS  M2 S2 N2 K2 K1 O1 P1 Q1
BOUNDARY6.INVERSE_BAROMETER YES
#BOUNDARY6.NSPONGE_HORZ  8
#BOUNDARY6.SPONGE_FACT  5.0   
BOUNDARY6.ADJUST_FLUX   -1.2 seconds
BOUNDARY6.DATA          forcing/omaps_ets.nc(eta=eta_t)
BOUNDARY6.CUSTOM.u1     uv_to_u1 forcing/omaps_uv.nc
BOUNDARY6.CUSTOM.u2     uv_to_u2 forcing/omaps_uv.nc
BOUNDARY6.START_LOC     127.55 -8.27
BOUNDARY6.END_LOC       127.3 -8.34
BOUNDARY6.MID_LOC       127.42 -8.31

BOUNDARY7.NAME          Pulau-Leti-west
BOUNDARY7.TYPE          u1
BOUNDARY7.BCOND_NOR     CUSTOM
BOUNDARY7.BCOND_NOR2D   VERTIN|TIDALC
BOUNDARY7.BCOND_ELE     NOTHIN|FILEIN|TIDALC
BOUNDARY7.BCOND_TAN     CUSTOM
BOUNDARY7.BCOND_TAN2D   VERTIN|TIDALC
BOUNDARY7.BCOND_TRA_ALL NOGRAD
BOUNDARY7.BCOND_TRA0    TRCONC
BOUNDARY7.BCOND_TRA1    TRCONC
BOUNDARY7.BCOND_VZ      NOGRAD
BOUNDARY7.BCOND_KZ      NOGRAD
BOUNDARY7.T_CONSTITUENTS  M2 S2 N2 K2 K1 O1 P1 Q1
BOUNDARY7.INVERSE_BAROMETER YES
#BOUNDARY7.NSPONGE_HORZ  8
#BOUNDARY7.SPONGE_FACT  5.0   
BOUNDARY7.ADJUST_FLUX   -1.2 seconds
BOUNDARY7.DATA          forcing/omaps_ets.nc(eta=eta_t)
BOUNDARY7.CUSTOM.u1     uv_to_u1 forcing/omaps_uv.nc
BOUNDARY7.CUSTOM.u2     uv_to_u2 forcing/omaps_uv.nc
BOUNDARY7.START_LOC     123.64 -10.4
BOUNDARY7.END_LOC       123.45 -10.63
BOUNDARY7.MID_LOC       123.57 -10.46

BATHYEXTFILE prm/national_2.95_bathy.txt
COORDFILE prm/national_2.95_bathy.txt